The most anticipated innovations coming in 2015 - The Washington Post http://t.co/4lJXFyb6Rt
8:10am January 13th 2015 via Hootsuite
A blast of cold jump-starts fat burning and generates body heat - The Washington Post http://t.co/np9Pg5ze7E
7:10am January 13th 2015 via Hootsuite
FWIW: I'm a GeoWhiz (9/10) Quiz: Can you name a city just by looking at its streets? - Washington Post http://t.co/BN28OHSjL7
6:55am January 13th 2015 via Hootsuite
RT @carlzimmer: Ebola deaths vs Ebola Google searches: a relentless climb vs fading interest. http://t.co/c906CPO6Wh http://t.co/k0So4GQpTr
5:55am January 13th 2015 via Hootsuite
What to Eat After the Apocalypse - Nautilus http://t.co/Wkioaa9k3p via http://t.co/aDbyxxiOyj
4:10am January 13th 2015 via Hootsuite
iPhone 'withdrawal' really makes people anxious - Futurity http://t.co/yF1SnV5G2u
3:15am January 13th 2015 via Hootsuite
RT @mbeisen: excellent article on absurdity of science publishing by @juliaoftoronto in @voxdotcom http://t.co/cpK7WkA0eK #openaccess
2:45am January 13th 2015 via Hootsuite
When personalized medicine, genomic research, and privacy collide. | Slate http://t.co/AvYkFYajCx #pm101
1:15am January 13th 2015 via Hootsuite
RT @TheEconomist: #Dailychart: Syria has become the biggest source of refugees in the world http://t.co/lifWR6Otvz http://t.co/gAuNnq2joO
7:42pm January 12th 2015 via Hootsuite in reply to
#PAGXXIII Thermo Fisher workshop starting in the Golden West room shortly. http://t.co/UlPjHyBpVs
3:58pm January 12th 2015 via Hootsuite
At 1250pm Golden West MT @iontorrent: At #PAGXXIII ? Dr. Schnable talks about novel genotyping approach w/o a reference using Ion Proton
2:44pm January 12th 2015 via Hootsuite in reply to
New post: Highly multiplexed PCR from any reference sequence | Behind the Bench http://t.co/sc18gZkqQy #PAGXXIII
2:36pm January 12th 2015 via Hootsuite
Today’s agenda for the @Lifetech workshop 1250pm Golden West http://t.co/G6vQFO9IOb #PAGXXIII Lots of GBS on @iontorrent BTW!
12:49pm January 12th 2015 via Hootsuite
TI:Q:What about gene-environment interaction? A:'That's the next R01' #PAGXXIII
12:31pm January 12th 2015 via Hootsuite
TI:Q:How complete does prot-prot data needs to be? A:Can 'degrade' the network ('13 Nature Bioech ref). Showed robustness #PAGXXIII
12:29pm January 12th 2015 via Hootsuite
TI:Q:Some genes better studied than others, affect results? A:Yes, can take into account 'over-connectedness' #PAGXXIII
12:28pm January 12th 2015 via Hootsuite
TI: Perhaps we are 'too close to the raw data'; looking at x-ray diffraction, rather than the overall structure. #PAGXXIII
12:24pm January 12th 2015 via Hootsuite
TI: Website for Network Extracted Ontology (NeXO) http://t.co/WzjxfsW3aI #PAGXXIII
TI: Hierarchy is experimentally derived; recovering 60% of literature-curated GO from their data #PAGXXIII
12:22pm January 12th 2015 via Hootsuite
TI: At that intermediate layer: a gene ontology. 2014 NAR ref http://t.co/zSTpKjQfaq 2013 Nat Biotech http://t.co/prIFt1O8GB #PAGXXIII
TI: a 2D protein-protein map, also gene co-exp, also genetic interaction in yeast. Cp to 3D '14 Cell http://t.co/oLT9nG2C9O #PAGXXIII
12:19pm January 12th 2015 via Hootsuite
TI: Next steps: networks are not only modular ('flat'), they are hierarchical and multi-scale. There are nested modules #PAGXXIII
12:17pm January 12th 2015 via Hootsuite
TI: Now with a priori knowledge of neurodegenerative genes, going back to exome data Novarino 2014 Science http://t.co/z3gpcnJl2m #PAGXXIII
12:16pm January 12th 2015 via Hootsuite
TI: Pathway mututations now ass'd with pt survival, separating 3 or 4 determined subtypes #PAGXXIII
12:11pm January 12th 2015 via Hootsuite
TI: Using network smoothing 2010 PLOS Comp Biol http://t.co/ZGaJTe1oRh Transforming raw gt's to a score for every gene #PAGXXIII
12:08pm January 12th 2015 via Hootsuite
TI: Using prior interaction - protein interaction sources (Pathway Commons MSKCC), HumanNet (UT Austin), StringDB (EMBL) #PAGXXIII
12:05pm January 12th 2015 via Hootsuite
TI: TP53 frequency of 351 pt tumors - abt every instance. Illust. case of too consistent (unhelpful) / too random (unhelpful) #PAGXXIII
12:03pm January 12th 2015 via Hootsuite
TI: Of the ~100 somatic mut's, ~10 driver mut's. 2nd ref TP53: 2014 Nature Gen http://t.co/mmgo41IktW #PAGXXIII
12:02pm January 12th 2015 via Hootsuite
TI: Using cancer as an example, w/TCGA data 2013 Nature Methods http://t.co/HXhP02Plqh ~100 somatic exome mut's #PAGXXIII
12:00pm January 12th 2015 via Hootsuite
TI: Using a subway-map: how to do it computationally? Recent F1000 Cytoscape ref http://t.co/NmgOCWjkDs #PAGXXIII
11:58am January 12th 2015 via Hootsuite
TI: 2013 review of Genotype to Phenotype via Network Analysis Curr Opin http://t.co/1vMBJN6Wgs #PAGXXIII
11:57am January 12th 2015 via Hootsuite
TI: Better GWAS types of studies: methods to use networks to translate, and methods to assemble and visualize network models #PAGXXIII
11:56am January 12th 2015 via Hootsuite
TI: Genotype-Phenotype translations via Networks: what if insert a 'network knowledge base', combining other prior knowledge? #PAGXXIII
11:55am January 12th 2015 via Hootsuite
Trey Ideker (UCSD USA) "Interpreting genome variants and mutations using a unified human genetic network" #PAGXXIII
11:53am January 12th 2015 via Hootsuite
RT @KristinaLWeber: Swimming with polar bears - time to visit Canada http://t.co/ZGei7a5MQl #pagxxiii @bonesandbugs
11:46am January 12th 2015 via Hootsuite
RT @AdriSuarezGonz: NG documentary on polar bears http://t.co/lzOajMt5N6 @bonesandbugs #PAGXXIII
BS: Q:Max range of hybridization? A: The more genomes examined, the more hybridization seen. #PAGXXIII
11:42am January 12th 2015 via Hootsuite
BS: Photo of kids swimming in front of a polar bear: unseen glass plate (in Ottawa) 'don't do this at home' #PAGXXIII
11:40am January 12th 2015 via Hootsuite
BS: Repeated natural backcrossing from 12K years: isn't it an exciting time? What's next? (More samples to sequence...) #PAGXXIII
BS: HMM model with 'skip' states between Polar, het PB & Brown: emission prob's across the 3 states. Excess PP than expected #PAGXXIII
11:37am January 12th 2015 via Hootsuite
RT @DJ_de_Koning: Beth Shapiro: Swedish brown bear was 'PURE'; American bears all admixed! #PAGXXIII
11:34am January 12th 2015 via Hootsuite
BS: Ancient Irish bears are also admixture. Figure from 2011 Edwards Curr Biol http://t.co/4Wu98BYpVf #PAGXXIII
11:33am January 12th 2015 via Hootsuite
RT @pop_gen_JED: BS mtDNA says polar bears originated from brown. But nuclear says polar very diff from brown. Lots of admixture #PAGXXIII
11:30am January 12th 2015 via Hootsuite
BS: Miller 2012 PNAS Paper: http://t.co/zR6b1wwRnt #PAGXXIII
11:29am January 12th 2015 via Hootsuite
RT @taylorlawley: BS: Genome sequences added in Miller et al 2012 PNAS w/ the attached resulting phylogeny #PAGXXIII http://t.co/Z33yCxGyfJ
11:28am January 12th 2015 via Hootsuite
Beth Shapiro: "The evolutionary consequences of interspecies hybridization: insights from ancient and modern bear genomes" #PAGXXIII
11:27am January 12th 2015 via Hootsuite
RT @dgmacarthur: Great list. MT @joe_pickrell: Books and papers I’ve found useful while working in human genomics http://t.co/VmzANmeut7
10:55am January 12th 2015 via Hootsuite
RT @sebhtml: DNA Sequencing Could Map the Brain’s Wiring http://t.co/kgMguVRd3i @TechReview #biotechnology
9:55am January 12th 2015 via Hootsuite in reply to
RT @pickover: Set of stairs. Deep well of Chand Baori. http://t.co/ustiip7Hp0 http://t.co/s3f7QTZuIn
8:15am January 12th 2015 via Hootsuite
Does Retweeting Praise Make You a Monster? -- Vulture http://t.co/0oS34WcNBB
7:20am January 12th 2015 via Hootsuite
